STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV01284.13-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein; COG: COG1250. (281 aa)    
Predicted Functional Partners:
EFV01286.1
acetyl-CoA C-acetyltransferase; COG: COG0183; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
crt
3-hydroxybutyryl-CoA dehydratase; COG: COG1024; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.998
EFV01152.1
Rubredoxin; COG: COG1960.
 0.982
nifJ
Pyruvate synthase; COG: COG0674.
     
 0.877
nifJ-2
Pyruvate synthase; COG: COG0674.
     
 0.876
EFV00737.1
Aldehyde dehydrogenase (NAD) family protein; COG: COG1012; Belongs to the aldehyde dehydrogenase family.
 
 
 0.785
EFV01496.1
Hypothetical protein.
  
 
 0.767
EFV01308.1
acyl-CoA dehydrogenase, C-terminal domain protein; COG: COG1960.
 0.722
EFV01365.1
acyl-CoA dehydrogenase, C-terminal domain protein; COG: COG1960.
 0.720
EFV00956.1
acyl-CoA dehydrogenase, C-terminal domain protein; COG: COG1960.
 0.718
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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