STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV01333.1Prephenate dehydrogenase; COG: COG0287. (300 aa)    
Predicted Functional Partners:
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
 0.986
pheA
Prephenate dehydratase; COG: COG0077.
 0.965
EFV02612.1
Putative chorismate mutase.
 
 0.960
cmk
Cytidylate kinase; COG: COG0283.
 
 
 0.918
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
 
 0.913
hisC
Histidinol-phosphate transaminase; COG: COG0079; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.904
EFV01210.1
Putative threonine-phosphate decarboxylase; COG: COG0079.
  
 
 0.904
EFV02326.1
Aminotransferase, class I/II.
    
 0.824
EFV02859.1
Aminotransferase AlaT; COG: COG0436.
  
 
 0.779
EFV01798.1
Aminotransferase, class I/II; COG: COG0436.
  
 
 0.779
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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