STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV01012.1TrkA C-terminal domain protein. (214 aa)    
Predicted Functional Partners:
nifJ
Pyruvate synthase; COG: COG0674.
    
  0.795
EFV01015.1
ABC transporter, permease protein; COG: COG1732.
 
     0.786
nifJ-2
Pyruvate synthase; COG: COG0674.
    
  0.775
EFV01969.1
PTS system, glucose-like IIB component; COG: COG1263.
  
 
 0.716
EFV01014.1
ABC transporter, permease protein; COG: COG1174.
 
     0.715
opuBA
Choline ABC transporter, ATP-binding protein OpuBA; COG: COG1125.
 
     0.677
EFV02450.1
ABC transporter, substrate-binding protein, QAT family; COG: COG4176.
 
  
 0.527
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.500
EFV02517.1
4Fe-4S binding domain protein.
  
     0.483
EFV00566.1
Cupin domain protein; COG: COG1917.
  
    0.447
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.