STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV01048.1ABC transporter, ATP-binding protein; COG: COG1126. (256 aa)    
Predicted Functional Partners:
EFV01348.1
ABC transporter, permease protein; COG: COG0765.
 0.999
EFV01049.1
ABC transporter, permease protein; COG: COG0765.
 0.999
EFV01050.1
ABC transporter, substrate-binding protein, family 3; COG: COG0834; Belongs to the bacterial solute-binding protein 3 family.
 0.993
EFV01349.1
ABC transporter, substrate-binding protein, family 3; COG: COG0834.
 0.991
EFV02329.1
ABC transporter, permease protein; COG: COG0765.
 0.989
EFV02316.1
ABC transporter, substrate-binding protein, family 3; COG: COG0834; Belongs to the bacterial solute-binding protein 3 family.
 0.949
EFV01980.1
ABC transporter, permease protein; COG: COG1173.
 
    
 0.903
EFV02415.1
Efflux ABC transporter, permease protein; COG: COG0577.
 
      0.900
EFV00515.1
ABC transporter, substrate-binding protein, family 3; COG: COG0834; Belongs to the bacterial solute-binding protein 3 family.
 0.870
EFV02875.1
ABC transporter, ATP-binding protein; COG: COG1132.
 
   
 
0.844
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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