STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV01153.1Putative iron-responsive transcriptional regulator. (152 aa)    
Predicted Functional Partners:
EFV01151.1
Metallo-beta-lactamase domain protein; COG: COG0426.
 
     0.663
EFV01152.1
Rubredoxin; COG: COG1960.
 
   
 0.658
EFV02071.1
Aminotransferase, class V; COG: COG1104.
  
 
 0.559
EFV01628.1
Putative cysteine desulfurase NifS; COG: COG1104.
  
 
 0.559
EFV00609.1
Aminotransferase, class V; COG: COG1104.
  
 
 0.559
EFV01154.1
Oxidoreductase, 2-nitropropane dioxygenase family protein; COG: COG2070.
       0.456
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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