STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV01160.1Na+/H+ antiporter family protein; COG: COG1757. (454 aa)    
Predicted Functional Partners:
EFV01159.1
Aminotransferase, class I/II; COG: COG1168.
  
    0.618
EFV01161.1
Putative endoribonuclease L-PSP; COG: COG0251.
  
    0.606
EFV02371.1
Na+/H+ antiporter family protein; COG: COG1757.
  
   
 0.512
EFV01158.1
Aminotransferase, class I/II; COG: COG1168.
  
    0.512
EFV01275.1
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; COG: COG1301; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
  
 0.428
EFV01157.1
Hypothetical protein.
       0.428
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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