STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV00952.1Transporter, major facilitator family protein. (416 aa)    
Predicted Functional Partners:
EFV00954.1
Oxidoreductase, 2-nitropropane dioxygenase family protein; COG: COG2070.
  
 
  0.716
EFV00951.1
4-hydroxyphenylacetate 3-hydroxylase family protein; COG: COG2368.
 
     0.690
cobA
uroporphyrinogen-III C-methyltransferase; COG: COG0007.
  
  
 0.667
EFV01996.1
Hydrogenase, Fe-only; COG: COG4624.
  
 
 0.656
EFV02887.1
Pyridine nucleotide-disulfide oxidoreductase; COG: COG0446.
  
 
 0.625
EFV02652.1
4Fe-4S binding domain protein; COG: COG1142.
    
 0.611
EFV00424.1
Hypothetical protein.
     
 0.599
EFV00873.1
Hypothetical protein; 1.1.5.3.
  
 
 0.598
EFV00953.1
AMP-binding enzyme; COG: COG1020.
  
    0.593
EFV00950.1
Hypothetical protein.
    
  0.591
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.