STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV00866.1acyl-CoA dehydrogenase, C-terminal domain protein; COG: COG1960. (377 aa)    
Predicted Functional Partners:
etfB
Electron transfer flavoprotein subunit beta; COG: COG2086.
 
 0.976
etfA
Electron transfer flavoprotein FAD-binding domain protein; COG: COG2025.
 
 0.966
EFV01496.1
Hypothetical protein.
  
 
 0.930
crt
3-hydroxybutyryl-CoA dehydratase; COG: COG1024; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.927
nifJ
Pyruvate synthase; COG: COG0674.
  
 0.918
EFV01286.1
acetyl-CoA C-acetyltransferase; COG: COG0183; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.900
nifJ-2
Pyruvate synthase; COG: COG0674.
  
 
 0.859
EFV01152.1
Rubredoxin; COG: COG1960.
 
0.841
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
 0.786
EFV00867.1
CoA-transferase family III protein; COG: COG1804; Belongs to the CoA-transferase III family.
 
 
 0.763
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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