STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV00878.1Hypothetical protein; 1.14.99.36. (270 aa)    
Predicted Functional Partners:
EFV00959.1
Hypothetical protein.
 
     0.665
EFV00879.1
Putative cyclase; COG: COG1878.
       0.618
EFV00937.1
Flavoprotein.
 
     0.603
EFV00442.1
BMC domain protein.
 
     0.522
EFV00939.1
ATP:cob(I)alamin adenosyltransferase; COG: COG2096; Belongs to the Cob(I)alamin adenosyltransferase family.
 
     0.457
EFV00880.1
Ribulose bisphosphate carboxylase large chain, catalytic domain protein; COG: COG1850; Belongs to the RuBisCO large chain family.
       0.409
EFV00934.1
Hypothetical protein.
 
     0.407
EFV00877.1
Hypothetical protein; COG: COG3395.
       0.405
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.