STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV00907.1Hypothetical protein. (83 aa)    
Predicted Functional Partners:
EFV00908.1
Hypothetical protein.
 
     0.922
thiD
Phosphomethylpyrimidine kinase; COG: COG0351.
 
  
 0.860
EFV02747.1
Hypothetical protein.
  
     0.556
EFV02739.1
Oxidoreductase, nitrogenase component 1.
  
     0.511
pyrB
Aspartate carbamoyltransferase; COG: COG0540; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.487
pyrI
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein; COG: COG1781.
   
    0.487
carB
Carbamoyl-phosphate synthase, large subunit; COG: COG0458; Belongs to the CarB family.
   
    0.474
carA
Carbamoyl-phosphate synthase, small subunit; COG: COG0505; Belongs to the CarA family.
   
    0.465
EFV02748.1
Oxidoreductase, nitrogenase component 1.
  
     0.463
EFV02740.1
Hypothetical protein.
  
     0.459
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.