STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV00665.1Bacterial transferase hexapeptide repeat protein; COG: COG0663. (529 aa)    
Predicted Functional Partners:
EFV00668.1
Amidohydrolase family protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
    0.591
EFV01562.1
Ribulose bisphosphate carboxylase large chain, catalytic domain protein; COG: COG1850; Belongs to the RuBisCO large chain family.
    
 
 0.560
EFV00880.1
Ribulose bisphosphate carboxylase large chain, catalytic domain protein; COG: COG1850; Belongs to the RuBisCO large chain family.
    
 
 0.560
EFV00758.1
Ribulose bisphosphate carboxylase large chain, catalytic domain protein; COG: COG1850; Belongs to the RuBisCO large chain family.
    
 
 0.560
EFV00664.1
Hydrolase, TatD family; COG: COG0084.
       0.474
pyrD
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate.
       0.468
pyrB
Aspartate carbamoyltransferase; COG: COG0540; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
       0.448
pyrI
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein; COG: COG1781.
       0.448
pyrF
Orotidine 5'-phosphate decarboxylase; COG: COG0284; Belongs to the OMP decarboxylase family. Type 2 subfamily.
       0.448
EFV00670.1
Dihydroorotate dehydrogenase, electron transfer subunit; COG: COG0543.
       0.448
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.