STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENO18791.1Hypothetical protein. (456 aa)    
Predicted Functional Partners:
nagA
N-acetylglucosamine-6-phosphate deacetylase; COG: COG1820.
 
  0.948
ptsG
PTS family glucose porter, IICBA component.
  
 
 0.878
scrA
PTS family sucrose porter, EIIBC component ScrA; COG: COG1263.
  
 
 0.878
ENO18790.1
Hypothetical protein.
 
     0.829
tpiA
Triose-phosphate isomerase; COG: COG0149.
  
 
  0.817
xylB
Xylulokinase; COG: COG1070.
 
  0.781
ENO18788.1
SIS domain protein; COG: COG0794.
  
    0.781
nagA2
N-acetylglucosamine-6-phosphate deacetylase; COG: COG1820.
 
  0.778
oppD
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein; COG: COG0444; Belongs to the ABC transporter superfamily.
       0.774
dppF
Dipeptide ABC superfamily ATP binding cassette transporter, ABC protein; COG: COG4608.
       0.773
Your Current Organism:
Schaalia cardiffensis
NCBI taxonomy Id: 888050
Other names: Actinomyces cardiffensis F0333, S. cardiffensis F0333, Schaalia cardiffensis F0333
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