STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppBDipeptide ABC superfamily ATP binding cassette transporter, permease protein; COG: COG0601. (308 aa)    
Predicted Functional Partners:
oppC
Oligopeptide ABC superfamily ATP binding cassette transporter, permease protein; COG: COG1173.
 
 0.995
ENO18002.1
ABC superfamily ATP binding cassette transporter, ABC protein; COG: COG0444; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
dppD
Dipeptide ABC superfamily ATP binding cassette transporter, ABC protein; COG: COG1123; Belongs to the ABC transporter superfamily.
 
 
 0.986
ENO18459.1
Oligopeptide ABC superfamily ATP binding cassette transporter peptide-binding protein; COG: COG4166.
 
 
 0.982
oppD
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein; COG: COG0444; Belongs to the ABC transporter superfamily.
 
 
 0.952
ENO18794.1
Oligopeptide ABC superfamily ATP binding cassette transporter permease; COG: COG1173.
 
 0.949
ENO18796.1
ABC superfamily ATP binding cassette transporter, binding protein; COG: COG0747.
 0.941
ENO18003.1
ABC superfamily ATP binding cassette transporter, ABC protein; COG: COG4608.
 
 0.924
dppF
Dipeptide ABC superfamily ATP binding cassette transporter, ABC protein; COG: COG4608.
 
 0.883
ENO18000.1
ABC superfamily ATP binding cassette transporter, binding protein; COG: COG0747.
 0.849
Your Current Organism:
Schaalia cardiffensis
NCBI taxonomy Id: 888050
Other names: Actinomyces cardiffensis F0333, S. cardiffensis F0333, Schaalia cardiffensis F0333
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