STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNMethionine ABC superfamily ATP binding cassette transporter, ABC protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family. (330 aa)    
Predicted Functional Partners:
metI
Methionine ABC superfamily ATP binding cassette transporter, membrane protein; COG: COG2011.
 
 0.999
metQ
Methionine ABC superfamily ATP binding cassette transporter, binding protein; COG: COG1464; Belongs to the nlpA lipoprotein family.
 
 0.999
ENO17708.1
ABC superfamily ATP binding cassette transporter, ABC/membrane protein; COG: COG1132.
 
    
0.887
ENO18651.1
ABC superfamily ATP binding cassette transporter, ABC/membrane protein; COG: COG1132.
 
     
0.805
metF
Methylenetetrahydrofolate reductase (NAD(P)H); COG: COG0685; Belongs to the methylenetetrahydrofolate reductase family.
   
 
 0.735
ENO19166.1
Hypothetical protein; COG: COG1132.
 
    
0.734
ENO18736.1
ABC superfamily ATP binding cassette transporter, membrane protein; COG: COG1132.
 
    
0.657
sirR
Iron repressor protein; COG: COG1321.
   
   0.620
ENO17719.1
Metal-dependent transcriptional regulator; COG: COG1321.
   
   0.620
ideR
Iron-dependent repressor IdeR; COG: COG1321.
    
   0.619
Your Current Organism:
Schaalia cardiffensis
NCBI taxonomy Id: 888050
Other names: Actinomyces cardiffensis F0333, S. cardiffensis F0333, Schaalia cardiffensis F0333
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