STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENO18031.1RbsD or FucU transporter; Belongs to the RbsD / FucU family. (143 aa)    
Predicted Functional Partners:
fucK
Rhamnulokinase; COG: COG1070.
 
 
  0.913
fucI
Arabinose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
 
  
 0.826
ENO18032.1
Hypothetical protein.
       0.773
ENO18039.1
Hypothetical protein.
 
     0.714
ENO18037.1
Hypothetical protein.
 
     0.674
srlD
Sorbitol-6-phosphate dehydrogenase; COG: COG1028.
 
     0.634
ENO18030.1
LacI family transcriptional regulator; COG: COG1609.
       0.619
rbsB
Ribose ABC superfamily ATP binding cassette transporter, binding protein; COG: COG1879.
 
     0.611
gatR
DeoR family transcriptional regulator; COG: COG1349.
 
     0.569
ENO18036.1
Hypothetical protein; COG: COG0022.
 
     0.497
Your Current Organism:
Schaalia cardiffensis
NCBI taxonomy Id: 888050
Other names: Actinomyces cardiffensis F0333, S. cardiffensis F0333, Schaalia cardiffensis F0333
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.