Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENO17349.1 | ENO17350.1 | HMPREF9004_1891 | HMPREF9004_1892 | Hypothetical protein. | MgtE intracellular region protein; COG: COG2239. | 0.669 |
ENO17349.1 | ENO17351.1 | HMPREF9004_1891 | HMPREF9004_1893 | Hypothetical protein. | Integral membrane protein; COG: COG4420. | 0.710 |
ENO17349.1 | mrp | HMPREF9004_1891 | HMPREF9004_1894 | Hypothetical protein. | Mrp ATPase family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.531 |
ENO17350.1 | ENO17349.1 | HMPREF9004_1892 | HMPREF9004_1891 | MgtE intracellular region protein; COG: COG2239. | Hypothetical protein. | 0.669 |
ENO17350.1 | ENO17351.1 | HMPREF9004_1892 | HMPREF9004_1893 | MgtE intracellular region protein; COG: COG2239. | Integral membrane protein; COG: COG4420. | 0.946 |
ENO17350.1 | ENO17353.1 | HMPREF9004_1892 | HMPREF9004_1895 | MgtE intracellular region protein; COG: COG2239. | O-methyltransferase; COG: COG4122. | 0.553 |
ENO17350.1 | ENO18764.1 | HMPREF9004_1892 | HMPREF9004_0434 | MgtE intracellular region protein; COG: COG2239. | Hypothetical protein; COG: COG0737; Belongs to the 5'-nucleotidase family. | 0.558 |
ENO17350.1 | ENO19103.1 | HMPREF9004_1892 | HMPREF9004_0022 | MgtE intracellular region protein; COG: COG2239. | Hypothetical protein. | 0.446 |
ENO17350.1 | guaA | HMPREF9004_1892 | HMPREF9004_1942 | MgtE intracellular region protein; COG: COG2239. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.911 |
ENO17350.1 | guaB2 | HMPREF9004_1892 | HMPREF9004_0439 | MgtE intracellular region protein; COG: COG2239. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.750 |
ENO17350.1 | mrp | HMPREF9004_1892 | HMPREF9004_1894 | MgtE intracellular region protein; COG: COG2239. | Mrp ATPase family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.672 |
ENO17350.1 | purA | HMPREF9004_1892 | HMPREF9004_1142 | MgtE intracellular region protein; COG: COG2239. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.481 |
ENO17350.1 | rdgB | HMPREF9004_1892 | HMPREF9004_1827 | MgtE intracellular region protein; COG: COG2239. | Non-canonical purine NTP pyrophosphatase RdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.441 |
ENO17351.1 | ENO17349.1 | HMPREF9004_1893 | HMPREF9004_1891 | Integral membrane protein; COG: COG4420. | Hypothetical protein. | 0.710 |
ENO17351.1 | ENO17350.1 | HMPREF9004_1893 | HMPREF9004_1892 | Integral membrane protein; COG: COG4420. | MgtE intracellular region protein; COG: COG2239. | 0.946 |
ENO17351.1 | ENO17353.1 | HMPREF9004_1893 | HMPREF9004_1895 | Integral membrane protein; COG: COG4420. | O-methyltransferase; COG: COG4122. | 0.514 |
ENO17351.1 | mrp | HMPREF9004_1893 | HMPREF9004_1894 | Integral membrane protein; COG: COG4420. | Mrp ATPase family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.672 |
ENO17353.1 | ENO17350.1 | HMPREF9004_1895 | HMPREF9004_1892 | O-methyltransferase; COG: COG4122. | MgtE intracellular region protein; COG: COG2239. | 0.553 |
ENO17353.1 | ENO17351.1 | HMPREF9004_1895 | HMPREF9004_1893 | O-methyltransferase; COG: COG4122. | Integral membrane protein; COG: COG4420. | 0.514 |
ENO17353.1 | mrp | HMPREF9004_1895 | HMPREF9004_1894 | O-methyltransferase; COG: COG4122. | Mrp ATPase family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.691 |
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