Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENO17377.1 | ENO17378.1 | HMPREF9004_1919 | HMPREF9004_1920 | TfoX domain family protein. | Hypothetical protein. | 0.572 |
ENO17377.1 | ENO17379.1 | HMPREF9004_1919 | HMPREF9004_1921 | TfoX domain family protein. | Appr-1-p processing enzyme family domain protein; COG: COG2110. | 0.489 |
ENO17377.1 | ENO19141.1 | HMPREF9004_1919 | HMPREF9004_0060 | TfoX domain family protein. | Sir2 family transcriptional regulator; COG: COG0846. | 0.723 |
ENO17378.1 | ENO17377.1 | HMPREF9004_1920 | HMPREF9004_1919 | Hypothetical protein. | TfoX domain family protein. | 0.572 |
ENO17378.1 | ENO17379.1 | HMPREF9004_1920 | HMPREF9004_1921 | Hypothetical protein. | Appr-1-p processing enzyme family domain protein; COG: COG2110. | 0.473 |
ENO17379.1 | ENO17377.1 | HMPREF9004_1921 | HMPREF9004_1919 | Appr-1-p processing enzyme family domain protein; COG: COG2110. | TfoX domain family protein. | 0.489 |
ENO17379.1 | ENO17378.1 | HMPREF9004_1921 | HMPREF9004_1920 | Appr-1-p processing enzyme family domain protein; COG: COG2110. | Hypothetical protein. | 0.473 |
ENO19141.1 | ENO17377.1 | HMPREF9004_0060 | HMPREF9004_1919 | Sir2 family transcriptional regulator; COG: COG0846. | TfoX domain family protein. | 0.723 |