STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGK59560.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
EGK59562.1
Lj928 prophage protein.
       0.778
EGK59558.1
Phosphoribosyl pyrophosphate synthetase.
       0.773
EGK59559.1
Hypothetical protein.
       0.773
EGK59561.1
Hypothetical protein.
       0.773
EGK59557.1
Hypothetical protein.
       0.762
EGK59563.1
Hypothetical protein.
       0.721
EGK59550.1
Hypothetical protein.
   
    0.653
EGK59320.1
Phage integrase family site-specific recombinase; COG: COG1961; overlaps another CDS with the same product name.
   
    0.653
EGK59321.1
Phage integrase family site-specific recombinase; COG: COG1961; overlaps another CDS with the same product name.
   
    0.653
EGK59187.1
Phage integrase family site-specific recombinase; COG: COG1961; overlaps another CDS with the same product name.
   
    0.653
Your Current Organism:
Centipeda periodontii
NCBI taxonomy Id: 888060
Other names: C. periodontii DSM 2778, Centipeda periodontii ATCC 35019, Centipeda periodontii DSM 2778, Centipeda periodontii str. DSM 2778, Centipeda periodontii strain DSM 2778
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.