STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbpCIron (Fe3+) ABC superfamily ATP binding cassette transporter, ABC protein; COG: COG3842; Belongs to the ABC transporter superfamily. (360 aa)    
Predicted Functional Partners:
sfuB
Fe3+ ABC superfamily ATP binding cassette transporter, permease protein; COG: COG1178.
 
 
 0.982
EGF14869.1
Iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein; COG: COG1840.
 
 
 0.955
EGF16629.1
Hypothetical protein.
 
 
 0.727
ttg2B
Toluene tolerance efflux ABC superfamily ATP binding cassette transporter, membrane protein; COG: COG0767; Belongs to the MlaE permease family.
    
  0.640
gnd
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
       0.549
Your Current Organism:
Dialister micraerophilus
NCBI taxonomy Id: 888062
Other names: D. micraerophilus DSM 19965, Dialister micraerophilus ADV 04.01, Dialister micraerophilus DSM 19965, Dialister micraerophilus str. DSM 19965, Dialister micraerophilus strain DSM 19965
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.