STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGF12600.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
EGF12599.1
cro/CI family transcriptional regulator.
 
    0.926
EGF12597.1
FtsK/SpoIIIE family protein.
 
    0.904
EGF12601.1
Antirestriction protein.
 
  
 0.902
EGF12602.1
Conjugative transposon membrane protein.
 
    0.902
EGF12603.1
Conjugative transposon protein.
 
    0.902
EGF12604.1
Conjugative transposon membrane protein.
 
    0.892
EGF12596.1
Conjugative transposon protein.
 
   
 0.891
EGF12595.1
Conjugative transposon protein.
 
    0.888
EGF12606.1
Conjugative transposon protein.
 
    0.862
EGF12605.1
NLP/P60 family protein; COG: COG0791.
 
    0.843
Your Current Organism:
Dialister micraerophilus
NCBI taxonomy Id: 888062
Other names: D. micraerophilus DSM 19965, Dialister micraerophilus ADV 04.01, Dialister micraerophilus DSM 19965, Dialister micraerophilus str. DSM 19965, Dialister micraerophilus strain DSM 19965
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.