STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFU74420.1Peptidase, U32 family; COG: COG0826. (412 aa)    
Predicted Functional Partners:
EFU74421.1
Peptidase, U32 family; COG: COG0826.
 
    
0.897
clpC
ATPase family associated with various cellular activities (AAA); COG: COG0542; Belongs to the ClpA/ClpB family.
       0.828
ctsR
Transcriptional repressor of CtsR; COG: COG4463; Belongs to the CtsR family.
       0.828
gor
Glutathione-disulfide reductase; COG: COG1249.
       0.758
EFU75084.1
Methyltransferase domain protein; COG: COG4122.
 
  
 0.677
ogt
6-O-methylguanine DNA methyltransferase, DNA binding domain protein; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
       0.414
sun
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
    0.401
Your Current Organism:
Enterococcus italicus
NCBI taxonomy Id: 888064
Other names: E. italicus DSM 15952, Enterococcus italicus DSM 15952, Enterococcus italicus LMG 22039, Enterococcus italicus TP1.5, Enterococcus italicus str. DSM 15952, Enterococcus italicus strain DSM 15952
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