STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAE44_0023623SNF2 domain-containing protein CLASSY 1. (1769 aa)    
Predicted Functional Partners:
BAE44_0026126
SNF2 domain-containing protein CLASSY 3.
  
  
0.918
BAE44_0006984
DNA repair and recombination protein RAD54.
  
  
 
0.918
BAE44_0001312
Chromatin structure-remodeling complex protein SYD.
  
0.844
BAE44_0008649
ATP-dependent DNA helicase SRS2-like protein.
   
 
 0.842
BAE44_0007162
Meiotic recombination protein DMC1-like protein; Belongs to the RecA family.
   
 
 0.839
BAE44_0021949
High mobility group B protein 15.
   
 0.807
BAE44_0025297
RuvB-like helicase.
    
 0.806
BAE44_0011637
DNA-directed RNA polymerases II, IV and V subunit 3.
   
 0.791
BAE44_0019798
Actin-related protein 5; Belongs to the actin family.
    
 0.785
BAE44_0012746
Crossover junction endonuclease MUS81.
   
 0.785
Your Current Organism:
Dichanthelium oligosanthes
NCBI taxonomy Id: 888268
Other names: D. oligosanthes, Dichanthelium oligosanthes (Schult.) Gould, Panicum oligosanthes, Panicum oligosanthes Schult.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.