STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAE44_0019347Polyphenol oxidase, chloroplastic. (578 aa)    
Predicted Functional Partners:
BAE44_0009834
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.902
BAE44_0021539
DNA-directed RNA polymerase II subunit RPB7.
    
 0.895
BAE44_0011637
DNA-directed RNA polymerases II, IV and V subunit 3.
    
 0.895
BAE44_0007385
DNA-directed RNA polymerases II, IV and V subunit 8B.
    
 0.895
BAE44_0000616
DNA-directed RNA polymerases IV and V subunit 4.
    
 0.895
BAE44_0007840
Arogenate dehydrogenase 2, chloroplastic.
     
 0.864
BAE44_0003264
Arogenate dehydrogenase 2, chloroplastic.
     
 0.864
BAE44_0016093
Putative cyclin-dependent kinase F-2.
    
 0.841
BAE44_0009089
HTH TFE/IIEalpha-type domain-containing protein.
    
 0.839
BAE44_0013529
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
    
 0.806
Your Current Organism:
Dichanthelium oligosanthes
NCBI taxonomy Id: 888268
Other names: D. oligosanthes, Dichanthelium oligosanthes (Schult.) Gould, Panicum oligosanthes, Panicum oligosanthes Schult.
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