STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAE44_0005855Pentatricopeptide repeat-containing protein. (498 aa)    
Predicted Functional Partners:
BAE44_0012005
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
   
 0.526
BAE44_0004266
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
  0.504
BAE44_0021163
Flowering time control protein FPA.
    
 
 0.487
BAE44_0007505
Protein NLRC3.
    
 
 0.460
BAE44_0003908
Uncharacterized protein.
      
 0.441
BAE44_0024202
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
  0.426
BAE44_0003035
Uncharacterized protein.
    
  0.426
BAE44_0001971
Uncharacterized protein.
      
 0.424
BAE44_0011985
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.411
Your Current Organism:
Dichanthelium oligosanthes
NCBI taxonomy Id: 888268
Other names: D. oligosanthes, Dichanthelium oligosanthes (Schult.) Gould, Panicum oligosanthes, Panicum oligosanthes Schult.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.