STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGC17534.1Hypothetical protein. (270 aa)    
Predicted Functional Partners:
cro
Regulatory protein cro.
       0.762
EGC17536.1
DNA-binding helix-turn-helix protein.
       0.534
algH
Putative ACR, COG1678; COG: COG1678; Belongs to the UPF0301 (AlgH) family.
   
    0.428
Your Current Organism:
Kingella denitrificans
NCBI taxonomy Id: 888741
Other names: K. denitrificans ATCC 33394, Kingella denitrificans ATCC 33394, Kingella denitrificans str. ATCC 33394, Kingella denitrificans strain ATCC 33394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.