STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV04985.1Glycosyltransferase, group 2 family protein; COG: COG0463. (316 aa)    
Predicted Functional Partners:
EFV04986.1
Hypothetical protein.
  
    0.812
EFV04984.1
Hypothetical protein.
       0.800
ctp
Peptidase, S41 family; COG: COG0793; Belongs to the peptidase S41A family.
 
     0.740
EFV04987.1
Hypothetical protein.
       0.722
apbE
ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.722
EFV04989.1
Cyclic nucleotide-binding domain protein.
       0.722
dcp
Peptidase family M3; COG: COG0339.
       0.710
EFV04991.1
Cytidine and deoxycytidylate deaminase zinc-binding region; COG: COG2131.
       0.710
fthC
5-formyltetrahydrofolate cyclo-ligase; COG: COG0212; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.710
mutS
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.603
Your Current Organism:
Prevotella salivae
NCBI taxonomy Id: 888832
Other names: P. salivae DSM 15606, Prevotella salivae DSM 15606, Prevotella salivae EPSA11, Prevotella salivae JCM 12084, Prevotella salivae str. DSM 15606, Prevotella salivae strain DSM 15606
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