STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV04152.1Hypothetical protein. (349 aa)    
Predicted Functional Partners:
EFV04153.1
Hypothetical protein.
       0.797
hmbR
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; COG: COG1629.
       0.795
EFV04155.1
Hypothetical protein.
       0.753
EFV04156.1
Hypothetical protein.
       0.737
EFV04157.1
Hypothetical protein.
       0.606
EFV04151.1
Hypothetical protein.
       0.592
EFV04150.1
Hypothetical protein.
       0.462
EFV04149.1
Methyltransferase domain protein; COG: COG0500.
       0.431
EFV04148.1
TonB-dependent receptor.
       0.419
Your Current Organism:
Prevotella salivae
NCBI taxonomy Id: 888832
Other names: P. salivae DSM 15606, Prevotella salivae DSM 15606, Prevotella salivae EPSA11, Prevotella salivae JCM 12084, Prevotella salivae str. DSM 15606, Prevotella salivae strain DSM 15606
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.