STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR75245.1RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa)    
Predicted Functional Partners:
APR75246.1
Hypothetical protein.
       0.773
APR75244.1
Hypothetical protein.
       0.661
APR75247.1
Multiple EGF-like-domain protein 3 precursor.
       0.623
APR83427.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.494
APR83099.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.493
APR75243.1
Hypothetical protein.
       0.485
APR75248.1
Hypothetical protein.
       0.462
APR88145.1
RNA polymerase sigma-70 factor, ECF subfamily protein.
  
     0.422
APR76713.1
RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.420
APR79000.1
RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.417
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.