STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR75599.1Transcriptional regulator, AraC family protein. (254 aa)    
Predicted Functional Partners:
APR75600.1
Hypothetical protein.
  
    0.792
APR87291.1
Transcriptional regulator, AraC family protein.
  
     0.654
APR79002.1
Transcriptional regulator, AraC family protein.
  
     0.518
APR82767.1
Transcriptional regulator, AraC family protein.
  
     0.500
APR75598.1
BNR repeat domain protein.
       0.488
APR75601.1
Light-harvesting LHII, alpha subunit B / Histone protein.
       0.462
APR80453.1
Hypothetical protein.
  
     0.439
APR86809.1
Hypothetical protein.
  
     0.425
APR82858.1
Transcriptional regulator, AraC family protein.
  
     0.420
APR81492.1
Transcriptional regulator, AraC family protein.
  
     0.417
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.