STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR76000.1Alpha/beta hydrolase domain protein. (326 aa)    
Predicted Functional Partners:
APR79233.1
Esterase/lipase.
  
     0.757
APR80911.1
Hypothetical protein.
 
     0.626
APR77522.1
Peptide synthetase.
  
 0.613
APR78796.1
Carboxylesterase family protein (lipO).
  
     0.590
APR76001.1
LrgA-associated membrane protein LrgB.
       0.526
APR76002.1
Antiholin-like protein LrgA.
       0.526
APR85104.1
NADH-ubiquinone oxidoreductase chain G.
    
 0.487
APR79498.1
NADH-ubiquinone oxidoreductase chain F.
    
  0.474
APR83693.1
Long-chain-fatty-acid CoA ligase.
  
 0.473
APR86156.1
Omega-3 polyunsaturated fatty acid synthase subunit, PfaA.
  
 0.469
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.