STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR76111.1Type IV fimbrial assembly, ATPase PilB. (568 aa)    
Predicted Functional Partners:
APR82319.1
Type IV fimbrial assembly protein PilC.
 
 0.988
APR81561.1
Type IV pilus biogenesis protein PilM.
 
 
 
 0.955
APR82081.1
Type IV fimbrial assembly protein PilC.
 
 0.938
APR81565.1
Type IV pilus biogenesis protein PilQ.
 
 
 
 0.917
APR84064.1
Leader peptidase (Prepilin peptidase); Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.878
APR81563.1
Type IV pilus biogenesis protein PilO.
  
 
 0.860
APR76110.1
Twitching motility protein PilT.
 
  
0.850
APR80698.1
Hypothetical protein.
    
   0.815
APR76109.1
Hypothetical protein.
       0.682
APR78449.1
Hypothetical protein.
  
 
 0.650
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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