STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR76617.1Response regulator of zinc sigma-54-dependent two-component system. (452 aa)    
Predicted Functional Partners:
APR76616.1
Serine/threonine protein kinase.
   
   0.797
APR85648.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.725
APR78272.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.667
APR75030.1
Hypothetical protein.
  
 
 0.617
APR81410.1
Hypothetical protein.
  
 
 0.617
APR84340.1
Hypothetical protein.
  
 
 0.617
APR77314.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.594
APR85732.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.590
APR85446.1
Signal transduction histidine kinase CheA.
  
 
 0.569
APR85750.1
Signal transduction histidine kinase CheA.
  
 
 0.569
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.