STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR77038.1Response regulator of zinc sigma-54-dependent two-component system. (461 aa)    
Predicted Functional Partners:
APR85648.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.741
APR78272.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.667
APR75030.1
Hypothetical protein.
  
 
 0.617
APR81410.1
Hypothetical protein.
  
 
 0.617
APR84340.1
Hypothetical protein.
  
 
 0.617
APR77314.1
Putative SigmaB asociated two-component system sensor protein.
  
 
 0.594
APR85732.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.590
APR85446.1
Signal transduction histidine kinase CheA.
  
 
 0.569
APR85750.1
Signal transduction histidine kinase CheA.
  
 
 0.569
APR77037.1
Hypothetical protein.
       0.543
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.