STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR77637.1VgrG protein. (1015 aa)    
Predicted Functional Partners:
APR81305.1
Hypothetical protein.
 
  
 0.932
APR80226.1
Hypothetical protein.
 
  
 0.877
APR81442.1
Hypothetical protein.
 
  
 0.877
APR80231.1
Hypothetical protein.
 
  
 0.867
APR81422.1
Hypothetical protein.
 
  
 0.865
APR80232.1
Hypothetical protein.
 
 
 0.861
APR80229.1
Hypothetical protein.
 
  
 0.849
APR80227.1
Protein ImpG/VasA.
 
  
 0.840
APR81441.1
Protein ImpG/VasA.
 
  
 0.840
APR81427.1
Putative transmembrane protein.
 
  
 0.838
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.