STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR77734.1Nitrogen regulation protein NtrX. (448 aa)    
Predicted Functional Partners:
APR77735.1
Sensor histidine kinase.
 
 
  0.963
APR82320.1
Two-component sensor PilS.
  
  0.775
APR85732.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.586
APR85648.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.579
APR86737.1
Chemotaxis protein methyltransferase CheR.
  
 
 0.558
APR82091.1
Sensor protein of zinc sigma-54-dependent two-component system.
  
   0.549
APR75453.1
Sensor protein of zinc sigma-54-dependent two-component system.
 
 
 0.540
APR75467.1
Flagellar sensor histidine kinase FleS.
  
   0.516
APR81084.1
Sensor histidine kinase.
 
   0.515
APR75519.1
Flagellar sensor histidine kinase FleS.
  
   0.504
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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