STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR78951.1Integrin-like protein. (595 aa)    
Predicted Functional Partners:
APR78952.1
Alcohol dehydrogenase.
       0.773
APR82662.1
Fibronectin type III domain protein.
  
     0.599
APR77851.1
Thiamin-phosphate pyrophosphorylase.
  
     0.588
APR77568.1
Multiple EGF-like-domain protein 3 precursor.
  
     0.554
APR78953.1
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
       0.539
APR85313.1
Hypothetical protein.
  
     0.521
APR88630.1
Microneme protein 4.
  
     0.512
APR77244.1
Phage tail fiber protein.
 
 
 0.488
APR77686.1
Microneme protein 4.
  
     0.485
APR87626.1
Hypothetical protein.
  
  
  0.484
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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