STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR79257.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
APR79256.1
Cell division protein FtsI.
 
  
 0.917
APR78702.1
Hypothetical protein.
  
  
 0.671
APR79283.1
Heavy metal binding protein.
  
  
 0.671
APR84179.1
Cell division protein FtsI.
  
  
 0.638
APR79258.1
Hypothetical protein.
       0.608
APR79255.1
Hypothetical protein.
       0.563
APR85666.1
Membrane protein.
  
     0.506
APR82249.1
Membrane protein.
  
     0.480
APR79259.1
Hypothetical protein.
       0.456
APR84555.1
Arginine/ornithine antiporter ArcD.
  
     0.454
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.