STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR79397.1Foldase protein PrsA precursor. (344 aa)    
Predicted Functional Partners:
APR87216.1
Outer membrane protein assembly factor YaeT precursor.
 
 
 0.700
APR83534.1
Lycopene beta cyclase.
  
     0.685
APR79398.1
Hypothetical protein.
       0.674
APR87097.1
FHA/TonB domain protein.
  
     0.664
APR82072.1
General secretion pathway protein N.
  
     0.659
APR86447.1
Hypothetical protein.
  
     0.629
APR78094.1
TPR repeat protein.
  
     0.601
APR87664.1
Hypothetical protein.
 
     0.599
APR85532.1
Hypothetical protein.
 
 
 0.586
APR84867.1
Polymyxin resistance protein ArnT.
  
     0.581
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.