STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR79549.1UDP-glucose dehydrogenase. (433 aa)    
Predicted Functional Partners:
APR80485.1
dTDP-glucose 4,6-dehydratase.
 
 0.971
APR82156.1
dTDP-glucose 4,6-dehydratase.
 
 0.970
APR83186.1
dTDP-glucose 4,6-dehydratase.
 0.968
APR80544.1
UDP-glucose 4-epimerase.
 
 0.947
APR77134.1
UDP-glucose 4-epimerase.
 
 0.939
APR76422.1
UDP-glucose 4-epimerase.
  
 0.932
APR77050.1
UDP-glucose 4-epimerase.
  
 0.932
APR77583.1
UDP-glucose 4-epimerase.
  
 0.932
APR82715.1
UDP-glucose 4-epimerase.
  
 0.932
APR87470.1
NAD-dependent epimerase/dehydratase.
  
 0.932
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.