STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR79680.1Large extracellular alpha-helical protein. (1905 aa)    
Predicted Functional Partners:
APR79679.1
Multimodular transpeptidase-transglycosylase.
 
   
 0.947
APR78665.1
Multimodular transpeptidase-transglycosylase.
 
   
 0.650
APR76340.1
Hypothetical protein.
 
  
 0.641
APR86670.1
Hypothetical protein.
 
  
 0.635
APR76123.1
Proteins containing SET domain protein.
    
 0.584
APR79240.1
Hypothetical protein.
 
  
 0.567
APR84326.1
Hypothetical protein.
 
  
 0.533
APR84823.1
Tetratricopeptide repeat protein.
  
 
  0.530
APR83762.1
Hypothetical protein.
  
  
 0.474
APR81551.1
Transglutaminase-like enzyme, putative cysteine protease.
  
 
  0.466
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.