STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR79821.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
APR79822.1
Hypothetical protein.
       0.532
APR79823.1
Hypothetical protein.
       0.532
APR79824.1
Hypothetical protein.
       0.532
APR79819.1
Cellobiose phosphotransferase system celC.
       0.498
APR79820.1
Radical SAM domain protein.
       0.498
APR79825.1
Hypothetical protein.
       0.451
APR79826.1
Radical SAM domain heme biosynthesis protein.
       0.451
APR79827.1
Hypothetical protein.
       0.451
APR79828.1
Hypothetical protein.
       0.451
APR79818.1
Protein-N(5)-glutamine methyltransferase PrmC.
       0.405
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.