STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR79826.1Radical SAM domain heme biosynthesis protein. (445 aa)    
Predicted Functional Partners:
APR79827.1
Hypothetical protein.
       0.792
APR79825.1
Hypothetical protein.
       0.773
APR79828.1
Hypothetical protein.
       0.773
APR82846.1
Heme biosynthesis protein.
  
     0.762
APR85672.1
Heme biosynthesis protein.
  
     0.762
APR85578.1
Coenzyme PQQ synthesis protein E.
  
     0.753
APR79561.1
Radical SAM, Pyruvate-formate lyase-activating enzyme.
  
     0.748
APR79810.1
Putative molybdopterin cofactor synthesis protein A.
  
     0.679
APR85425.1
Hypothetical protein.
  
     0.663
APR79822.1
Hypothetical protein.
       0.642
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.