STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR80017.1Choline dehydrogenase. (504 aa)    
Predicted Functional Partners:
APR78651.1
Choline dehydrogenase.
  
  
 
0.929
APR87278.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.914
APR83836.1
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
     
 0.802
APR76542.1
Phospholipase C 4 precursor.
     
  0.800
APR78080.1
Phospholipase C 4 precursor.
     
  0.800
APR78765.1
Acid phosphatase.
     
  0.800
APR81574.1
Acid phosphatase.
     
  0.800
APR86288.1
Acid phosphatase.
     
  0.800
APR87308.1
Acid phosphatase.
     
  0.800
APR80016.1
Hypothetical protein.
       0.608
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.