STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR80569.1Metal-dependent hydrolase of the beta-lactamase superfamily I. (302 aa)    
Predicted Functional Partners:
APR80570.1
Hypothetical protein.
       0.773
APR76280.1
Adenylate cyclase.
 
     0.711
APR84383.1
Adenylate cyclase.
 
     0.707
APR84028.1
Adenylate cyclase.
 
     0.697
APR80571.1
Hypothetical protein.
       0.655
APR84128.1
GAF domain protein.
 
     0.611
APR84300.1
Adenylate cyclase.
 
     0.561
APR83651.1
cAMP-binding protein.
 
     0.503
APR84109.1
Adenylate cyclase.
 
     0.497
APR76966.1
Two-component sensor histidine kinase.
  
  
 0.461
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.