STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR81141.1Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. (344 aa)    
Predicted Functional Partners:
APR81538.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.969
APR80875.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.967
APR77753.1
Diphosphomevalonate decarboxylase.
  
 0.938
fni
Isopentenyl-diphosphate delta-isomerase, FMN-dependent; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
 
 0.931
APR78397.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
 
0.927
APR82961.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
 
0.926
APR77751.1
Geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
 
0.925
APR83585.1
Geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
0.913
APR77691.1
Squalene synthase.
  
 0.899
APR82778.1
Squalene synthase.
  
 0.899
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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