STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR81461.1Pentapeptide repeat family protein. (201 aa)    
Predicted Functional Partners:
APR79853.1
Hypothetical protein.
  
     0.662
APR84103.1
Hypothetical protein.
 
     0.604
APR88233.1
Hypothetical protein.
 
     0.603
APR77370.1
Hypothetical protein.
  
     0.547
APR85487.1
Putative outer membrane autotransporter barrel.
  
     0.524
APR77428.1
Peptidase C14, caspase catalytic subunit p20 precursor.
  
     0.517
APR81462.1
Hypothetical protein.
       0.515
APR77476.1
Putative exported protein.
  
     0.478
APR76627.1
Hypothetical protein.
  
     0.475
APR82343.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.