STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR81535.1Sterol desaturase family protein. (266 aa)    
Predicted Functional Partners:
APR81534.1
Delta(24(24(1)))-sterol reductase.
 
  
  0.979
APR77627.1
Hypothetical protein.
     
  0.900
APR88428.1
Hypothetical protein.
  
     0.758
APR77692.1
Monooxygenase, FAD-binding protein.
  
   0.745
APR75331.1
Delta(24(24(1)))-sterol reductase.
  
     0.741
APR75532.1
Squalene--hopene cyclase.
  
 
 0.706
APR82778.1
Squalene synthase.
 
 
 0.569
APR75533.1
Cytochrome P450 51.
  
 
 0.541
APR74968.1
Acetylglutamate kinase.
 
     0.492
APR82883.1
Hydroxymethylglutaryl-CoA synthase.
   
 
 0.490
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.