STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR81967.13-methylmercaptopropionyl-CoA ligase. (543 aa)    
Predicted Functional Partners:
APR84357.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
0.792
APR75501.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
0.745
APR77523.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
0.745
APR77526.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
0.745
APR77528.1
Siderophore biosynthesis non-ribosomal peptide synthetase.
  
 
0.745
APR77744.1
Enoyl-CoA hydratase.
 
 0.669
APR81966.1
Sarcosine oxidase beta subunit protein.
  
  
 0.639
APR84682.1
Acyl-CoA dehydrogenase.
 
 
  0.619
APR84799.1
Enoyl-CoA hydratase.
 
 
 0.617
APR85158.1
Enoyl-CoA hydratase.
  
 
 0.617
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.