APR82134.1 protein (Minicystis rosea) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

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Score

APR82134.1

tRNAHis-5'-guanylyltransferase. (249 aa)

Predicted Functional Partners:

APR82133.1

0.971

APR87413.1

0.633

APR87355.1

0.614

APR87354.1

0.565

APR82428.1

0.548

APR85182.1

0.535

APR82132.1

0.524

APR75966.1

0.506

APR80558.1

0.491

APR77398.1

0.484

Your Current Organism:

Minicystis rosea

NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APR75966.1	APR77398.1	A7982_01313	A7982_02745	Hypothetical protein.	Putative membrane protein.	0.552
APR75966.1	APR82133.1	A7982_01313	A7982_07482	Hypothetical protein.	Hypothetical protein.	0.446
APR75966.1	APR82134.1	A7982_01313	A7982_07483	Hypothetical protein.	tRNAHis-5'-guanylyltransferase.	0.506
APR75966.1	APR82428.1	A7982_01313	A7982_07777	Hypothetical protein.	Putative membrane protein.	0.698
APR75966.1	APR87355.1	A7982_01313	A7982_12704	Hypothetical protein.	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.	0.472
APR77398.1	APR75966.1	A7982_02745	A7982_01313	Putative membrane protein.	Hypothetical protein.	0.552
APR77398.1	APR82134.1	A7982_02745	A7982_07483	Putative membrane protein.	tRNAHis-5'-guanylyltransferase.	0.484
APR77398.1	APR87354.1	A7982_02745	A7982_12703	Putative membrane protein.	Hypothetical protein.	0.423
APR80558.1	APR82134.1	A7982_05905	A7982_07483	N-formylglutamate deformylase.	tRNAHis-5'-guanylyltransferase.	0.491
APR82132.1	APR82133.1	A7982_07481	A7982_07482	Hypothetical protein.	Hypothetical protein.	0.545
APR82132.1	APR82134.1	A7982_07481	A7982_07483	Hypothetical protein.	tRNAHis-5'-guanylyltransferase.	0.524
APR82133.1	APR75966.1	A7982_07482	A7982_01313	Hypothetical protein.	Hypothetical protein.	0.446
APR82133.1	APR82132.1	A7982_07482	A7982_07481	Hypothetical protein.	Hypothetical protein.	0.545
APR82133.1	APR82134.1	A7982_07482	A7982_07483	Hypothetical protein.	tRNAHis-5'-guanylyltransferase.	0.971
APR82133.1	APR87413.1	A7982_07482	A7982_12762	Hypothetical protein.	Putative membrane protein.	0.456
APR82134.1	APR75966.1	A7982_07483	A7982_01313	tRNAHis-5'-guanylyltransferase.	Hypothetical protein.	0.506
APR82134.1	APR77398.1	A7982_07483	A7982_02745	tRNAHis-5'-guanylyltransferase.	Putative membrane protein.	0.484
APR82134.1	APR80558.1	A7982_07483	A7982_05905	tRNAHis-5'-guanylyltransferase.	N-formylglutamate deformylase.	0.491
APR82134.1	APR82132.1	A7982_07483	A7982_07481	tRNAHis-5'-guanylyltransferase.	Hypothetical protein.	0.524
APR82134.1	APR82133.1	A7982_07483	A7982_07482	tRNAHis-5'-guanylyltransferase.	Hypothetical protein.	0.971

page 1 of 3

Network Stats

number of nodes:

11

number of edges:

55

average node degree:

10

avg. local clustering coefficient:

1

expected number of edges:

12

PPI enrichment p-value:

< 1.0e-16

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0071973

Bacterial-type flagellum-dependent cell motility

7 of 17

2.15

4.63

5.55e-11

GO:0044781

Bacterial-type flagellum organization

4 of 13

2.03

2.29

2.01e-05

GO:0044780

Bacterial-type flagellum assembly

2 of 7

2.0

0.75

0.0387

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003774

Cytoskeletal motor activity

4 of 8

2.24

2.53

1.12e-05

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0009288

Bacterial-type flagellum

10 of 21

2.22

7.52

3.83e-19

GO:0009425

Bacterial-type flagellum basal body

9 of 16

2.29

7.36

1.12e-17

GO:0030694

Bacterial-type flagellum basal body, rod

4 of 5

2.44

3.59

1.10e-07

GO:0009426

Bacterial-type flagellum basal body, distal rod

2 of 2

2.54

1.65

0.00091

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:2283

Flagellar assembly

11 of 21

2.26

8.42

1.74e-21

CL:2284

Bacterial-type flagellum basal body, and Bacterial-type flagellum hook

8 of 15

2.27

6.26

1.00e-14

CL:2287

Bacterial-type flagellum basal body, rod, and Flagellar hook-basal body protein, FlgE/F/G

4 of 5

2.44

3.34

3.54e-07

CL:2314

Bacterial flagellum protein export, and Bacterial-type flagellum assembly

2 of 5

2.14

1.05

0.0109

CL:2302

Cytoskeletal motor activity, and Bacterial-type flagellum hook

2 of 6

2.06

0.99

0.0134

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map02040

Flagellar assembly

11 of 31

2.09

7.29

8.58e-21

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0009288

Bacterial-type flagellum

10 of 22

2.2

7.31

9.52e-19

GOCC:0009425

Bacterial-type flagellum basal body

9 of 16

2.29

7.28

1.91e-17

GOCC:0009426

Bacterial-type flagellum basal body, distal rod

2 of 2

2.54

1.49

0.0018

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0975

Bacterial flagellum

7 of 12

2.3

5.54

1.48e-12

KW-0282

Flagellum

6 of 14

2.17

4.33

4.31e-10

KW-1005

Bacterial flagellum biogenesis

2 of 7

2.0

1.02

0.0112

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF06429

Flagellar basal body rod FlgEFG protein C-terminal

3 of 5

2.32

1.74

0.00053

PF00460

Flagella basal body rod protein

3 of 5

2.32

1.74

0.00053

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR010930

Flagellar basal-body/hook protein, C-terminal domain

3 of 5

2.32

1.52

0.0014

IPR001444

Flagellar basal body rod protein, N-terminal

3 of 5

2.32

1.52

0.0014

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