STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR82381.1Vanillate O-demethylase oxygenase subunit protein. (343 aa)    
Predicted Functional Partners:
APR82382.1
Putative monooxygenase.
 
     0.804
APR88213.1
Phenylpropionate dioxygenase.
 
     0.767
APR81195.1
Multicopper oxidase.
  
     0.544
APR79832.1
Phenylpropionate dioxygenase.
  
     0.524
APR86670.1
Hypothetical protein.
  
     0.522
APR86990.1
Nitrite reductase [NAD(P)H] small subunit protein.
 
  
 0.510
APR82380.1
Glycosyltransferase.
       0.504
APR84476.1
2-keto-4-pentenoate hydratase.
 
   
 0.477
APR76340.1
Hypothetical protein.
  
     0.473
APR80725.1
Transcriptional regulator, TetR family protein.
  
     0.465
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.